Precision Immunology Laboratory Featured Publications | NYU Langone Health

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Precision Immunology Laboratory Precision Immunology Laboratory Featured Publications

Precision Immunology Laboratory Featured Publications

Our staff members and collaborators frequently publish their research in leading peer-reviewed publications. Here is a selection of their recent accomplishments.

Selected Publications

A Cytometrist's Guide to Coordinating and Performing Effective COVID-19 Research

Chattopadhyay, Pratip K; Filby, Andrew; Jellison, Evan R; Ferrari, Guido; Green, Cherie; Cherian, Sindhu; Irish, Jonathan; Litwin, Virginia

Cytometry A. 2020 Aug 16;

Nivolumab and ipilimumab are associated with distinct immune landscape changes and response-associated immunophenotypes

Woods, David M; Laino, Andressa S; Winters, Aidan F; Alexandre, Jason M; Freeman, Daniel; Rao, Vinay; Adavani, Santi S; Weber, Jeffrey S; Chattopadhyay, Pratip K

JCI insight. 2020 Jun 04; 5:

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)

Cossarizza, Andrea; Chang, Hyun-Dong; Radbruch, Andreas; Acs, Andreas; Adam, Dieter; Adam-Klages, Sabine; Agace, William W; Aghaeepour, Nima; Akdis, Mübeccel; Allez, Matthieu; Almeida, Larissa Nogueira; Alvisi, Giorgia; Anderson, Graham; Andrä, Immanuel; Annunziato, Francesco; Anselmo, Achille; Bacher, Petra; Baldari, Cosima T; Bari, Sudipto; Barnaba, Vincenzo; Barros-Martins, Joana; Battistini, Luca; Bauer, Wolfgang; Baumgart, Sabine; Baumgarth, Nicole; Baumjohann, Dirk; Baying, Bianka; Bebawy, Mary; Becher, Burkhard; Beisker, Wolfgang; Benes, Vladimir; Beyaert, Rudi; Blanco, Alfonso; Boardman, Dominic A; Bogdan, Christian; Borger, Jessica G; Borsellino, Giovanna; Boulais, Philip E; Bradford, Jolene A; Brenner, Dirk; Brinkman, Ryan R; Brooks, Anna E S; Busch, Dirk H; Büscher, Martin; Bushnell, Timothy P; Calzetti, Federica; Cameron, Garth; Cammarata, Ilenia; Cao, Xuetao; Cardell, Susanna L; Casola, Stefano; Cassatella, Marco A; Cavani, Andrea; Celada, Antonio; Chatenoud, Lucienne; Chattopadhyay, Pratip K; Chow, Sue; Christakou, Eleni; Čičin-Šain, Luka; Clerici, Mario; Colombo, Federico S; Cook, Laura; Cooke, Anne; Cooper, Andrea M; Corbett, Alexandra J; Cosma, Antonio; Cosmi, Lorenzo; Coulie, Pierre G; Cumano, Ana; Cvetkovic, Ljiljana; Dang, Van Duc; Dang-Heine, Chantip; Davey, Martin S; Davies, Derek; De Biasi, Sara; Del Zotto, Genny; Dela Cruz, Gelo Victoriano; Delacher, Michael; Della Bella, Silvia; Dellabona, Paolo; Deniz, Günnur; Dessing, Mark; Di Santo, James P; Diefenbach, Andreas; Dieli, Francesco; Dolf, Andreas; Dörner, Thomas; Dress, Regine J; Dudziak, Diana; Dustin, Michael; Dutertre, Charles-Antoine; Ebner, Friederike; Eckle, Sidonia B G; Edinger, Matthias; Eede, Pascale; Ehrhardt, Götz R A; Eich, Marcus; Engel, Pablo; Engelhardt, Britta; Erdei, Anna; Esser, Charlotte; Everts, Bart; Evrard, Maximilien; Falk, Christine S; Fehniger, Todd A; Felipo-Benavent, Mar; Ferry, Helen; Feuerer, Markus; Filby, Andrew; Filkor, Kata; Fillatreau, Simon; Follo, Marie; Förster, Irmgard; Foster, John; Foulds, Gemma A; Frehse, Britta; Frenette, Paul S; Frischbutter, Stefan; Fritzsche, Wolfgang; Galbraith, David W; Gangaev, Anastasia; Garbi, Natalio; Gaudilliere, Brice; Gazzinelli, Ricardo T; Geginat, Jens; Gerner, Wilhelm; Gherardin, Nicholas A; Ghoreschi, Kamran; Gibellini, Lara; Ginhoux, Florent; Goda, Keisuke; Godfrey, Dale I; Goettlinger, Christoph; González-Navajas, Jose M; Goodyear, Carl S; Gori, Andrea; Grogan, Jane L; Grummitt, Daryl; Grützkau, Andreas; Haftmann, Claudia; Hahn, Jonas; Hammad, Hamida; Hämmerling, Günter; Hansmann, Leo; Hansson, Goran; Harpur, Christopher M; Hartmann, Susanne; Hauser, Andrea; Hauser, Anja E; Haviland, David L; Hedley, David; Hernández, Daniela C; Herrera, Guadalupe; Herrmann, Martin; Hess, Christoph; Höfer, Thomas; Hoffmann, Petra; Hogquist, Kristin; Holland, Tristan; Höllt, Thomas; Holmdahl, Rikard; Hombrink, Pleun; Houston, Jessica P; Hoyer, Bimba F; Huang, Bo; Huang, Fang-Ping; Huber, Johanna E; Huehn, Jochen; Hundemer, Michael; Hunter, Christopher A; Hwang, William Y K; Iannone, Anna; Ingelfinger, Florian; Ivison, Sabine M; Jäck, Hans-Martin; Jani, Peter K; Jávega, Beatriz; Jonjic, Stipan; Kaiser, Toralf; Kalina, Tomas; Kamradt, Thomas; Kaufmann, Stefan H E; Keller, Baerbel; Ketelaars, Steven L C; Khalilnezhad, Ahad; Khan, Srijit; Kisielow, Jan; Klenerman, Paul; Knopf, Jasmin; Koay, Hui-Fern; Kobow, Katja; Kolls, Jay K; Kong, Wan Ting; Kopf, Manfred; Korn, Thomas; Kriegsmann, Katharina; Kristyanto, Hendy; Kroneis, Thomas; Krueger, Andreas; Kühne, Jenny; Kukat, Christian; Kunkel, Désirée; Kunze-Schumacher, Heike; Kurosaki, Tomohiro; Kurts, Christian; Kvistborg, Pia; Kwok, Immanuel; Landry, Jonathan; Lantz, Olivier; Lanuti, Paola; LaRosa, Francesca; Lehuen, Agnès; LeibundGut-Landmann, Salomé; Leipold, Michael D; Leung, Leslie Y T; Levings, Megan K; Lino, Andreia C; Liotta, Francesco; Litwin, Virginia; Liu, Yanling; Ljunggren, Hans-Gustaf; Lohoff, Michael; Lombardi, Giovanna; Lopez, Lilly; López-Botet, Miguel; Lovett-Racke, Amy E; Lubberts, Erik; Luche, Herve; Ludewig, Burkhard; Lugli, Enrico; Lunemann, Sebastian; Maecker, Holden T; Maggi, Laura; Maguire, Orla; Mair, Florian; Mair, Kerstin H; Mantovani, Alberto; Manz, Rudolf A; Marshall, Aaron J; Martínez-Romero, Alicia; Martrus, Glòria; Marventano, Ivana; Maslinski, Wlodzimierz; Matarese, Giuseppe; Mattioli, Anna Vittoria; Maueröder, Christian; Mazzoni, Alessio; McCluskey, James; McGrath, Mairi; McGuire, Helen M; McInnes, Iain B; Mei, Henrik E; Melchers, Fritz; Melzer, Susanne; Mielenz, Dirk; Miller, Stephen D; Mills, Kingston H G; Minderman, Hans; Mjösberg, Jenny; Moore, Jonni; Moran, Barry; Moretta, Lorenzo; Mosmann, Tim R; Müller, Susann; Multhoff, Gabriele; Muñoz, Luis Enrique; Münz, Christian; Nakayama, Toshinori; Nasi, Milena; Neumann, Katrin; Ng, Lai Guan; Niedobitek, Antonia; Nourshargh, Sussan; Núñez, Gabriel; O'Connor, José-Enrique; Ochel, Aaron; Oja, Anna; Ordonez, Diana; Orfao, Alberto; Orlowski-Oliver, Eva; Ouyang, Wenjun; Oxenius, Annette; Palankar, Raghavendra; Panse, Isabel; Pattanapanyasat, Kovit; Paulsen, Malte; Pavlinic, Dinko; Penter, Livius; Peterson, Pärt; Peth, Christian; Petriz, Jordi; Piancone, Federica; Pickl, Winfried F; Piconese, Silvia; Pinti, Marcello; Pockley, A Graham; Podolska, Malgorzata Justyna; Poon, Zhiyong; Pracht, Katharina; Prinz, Immo; Pucillo, Carlo E M; Quataert, Sally A; Quatrini, Linda; Quinn, Kylie M; Radbruch, Helena; Radstake, Tim R D J; Rahmig, Susann; Rahn, Hans-Peter; Rajwa, Bartek; Ravichandran, Gevitha; Raz, Yotam; Rebhahn, Jonathan A; Recktenwald, Diether; Reimer, Dorothea; Reis E Sousa, Caetano; Remmerswaal, Ester B M; Richter, Lisa; Rico, Laura G; Riddell, Andy; Rieger, Aja M; Robinson, J Paul; Romagnani, Chiara; Rubartelli, Anna; Ruland, Jürgen; Saalmüller, Armin; Saeys, Yvan; Saito, Takashi; Sakaguchi, Shimon; Sala-de-Oyanguren, Francisco; Samstag, Yvonne; Sanderson, Sharon; Sandrock, Inga; Santoni, Angela; Sanz, Ramon Bellmàs; Saresella, Marina; Sautes-Fridman, Catherine; Sawitzki, Birgit; Schadt, Linda; Scheffold, Alexander; Scherer, Hans U; Schiemann, Matthias; Schildberg, Frank A; Schimisky, Esther; Schlitzer, Andreas; Schlosser, Josephine; Schmid, Stephan; Schmitt, Steffen; Schober, Kilian; Schraivogel, Daniel; Schuh, Wolfgang; Schüler, Thomas; Schulte, Reiner; Schulz, Axel Ronald; Schulz, Sebastian R; Scottá, Cristiano; Scott-Algara, Daniel; Sester, David P; Shankey, T Vincent; Silva-Santos, Bruno; Simon, Anna Katharina; Sitnik, Katarzyna M; Sozzani, Silvano; Speiser, Daniel E; Spidlen, Josef; Stahlberg, Anders; Stall, Alan M; Stanley, Natalie; Stark, Regina; Stehle, Christina; Steinmetz, Tobit; Stockinger, Hannes; Takahama, Yousuke; Takeda, Kiyoshi; Tan, Leonard; Tárnok, Attila; Tiegs, Gisa; Toldi, Gergely; Tornack, Julia; Traggiai, Elisabetta; Trebak, Mohamed; Tree, Timothy I M; Trotter, Joe; Trowsdale, John; Tsoumakidou, Maria; Ulrich, Henning; Urbanczyk, Sophia; van de Veen, Willem; van den Broek, Maries; van der Pol, Edwin; Van Gassen, Sofie; Van Isterdael, Gert; van Lier, René A W; Veldhoen, Marc; Vento-Asturias, Salvador; Vieira, Paulo; Voehringer, David; Volk, Hans-Dieter; von Borstel, Anouk; von Volkmann, Konrad; Waisman, Ari; Walker, Rachael V; Wallace, Paul K; Wang, Sa A; Wang, Xin M; Ward, Michael D; Ward-Hartstonge, Kirsten A; Warnatz, Klaus; Warnes, Gary; Warth, Sarah; Waskow, Claudia; Watson, James V; Watzl, Carsten; Wegener, Leonie; Weisenburger, Thomas; Wiedemann, Annika; Wienands, Jürgen; Wilharm, Anneke; Wilkinson, Robert John; Willimsky, Gerald; Wing, James B; Winkelmann, Rieke; Winkler, Thomas H; Wirz, Oliver F; Wong, Alicia; Wurst, Peter; Yang, Jennie H M; Yang, Juhao; Yazdanbakhsh, Maria; Yu, Liping; Yue, Alice; Zhang, Hanlin; Zhao, Yi; Ziegler, Susanne Maria; Zielinski, Christina; Zimmermann, Jakob; Zychlinsky, Arturo

European journal of immunology. 2019 Oct ; 49:1457-1973

High-Parameter Single-Cell Analysis

Chattopadhyay, Pratip K; Winters, Aidan F; Lomas Iii, Woodrow E; Laino, Andressa S; Woods, David M

Annual review of analytical chemistry. 2019 Jun 12; 12:411-430

A deadly dance: the choreography of host-pathogen interactions, as revealed by single-cell technologies

Chattopadhyay, Pratip K; Roederer, Mario; Bolton, Diane L

Nature communications. 2018 11 06; 9:4638

Kinetics of adult hematopoietic stem cell differentiation in vivo

Upadhaya, Samik; Sawai, Catherine M; Papalexi, Efthymia; Rashidfarrokhi, Ali; Jang, Geunhyo; Chattopadhyay, Pratip; Satija, Rahul; Reizis, Boris

Journal of experimental medicine. 2018 Nov 05; 215:2815-2832

OMIP-050: A 28-color/30-parameter Fluorescence Flow Cytometry Panel to Enumerate and Characterize Cells Expressing a Wide Array of Immune Checkpoint Molecules

Nettey, Leonard; Giles, Amber J; Chattopadhyay, Pratip K

Cytometry A. 2018 Nov ; 93:1094-1096

Guidelines for the use of flow cytometry and cell sorting in immunological studies

Cossarizza, Andrea; Chang, Hyun-Dong; Radbruch, Andreas; Akdis, Mübeccel; Andrä, Immanuel; Annunziato, Francesco; Bacher, Petra; Barnaba, Vincenzo; Battistini, Luca; Bauer, Wolfgang M; Baumgart, Sabine; Becher, Burkhard; Beisker, Wolfgang; Berek, Claudia; Blanco, Alfonso; Borsellino, Giovanna; Boulais, Philip E; Brinkman, Ryan R; Büscher, Martin; Busch, Dirk H; Bushnell, Timothy P; Cao, Xuetao; Cavani, Andrea; Chattopadhyay, Pratip K; Cheng, Qingyu; Chow, Sue; Clerici, Mario; Cooke, Anne; Cosma, Antonio; Cosmi, Lorenzo; Cumano, Ana; Dang, Van Duc; Davies, Derek; De Biasi, Sara; Del Zotto, Genny; Della Bella, Silvia; Dellabona, Paolo; Deniz, Günnur; Dessing, Mark; Diefenbach, Andreas; Di Santo, James; Dieli, Francesco; Dolf, Andreas; Donnenberg, Vera S; Dörner, Thomas; Ehrhardt, Götz R A; Endl, Elmar; Engel, Pablo; Engelhardt, Britta; Esser, Charlotte; Everts, Bart; Dreher, Anita; Falk, Christine S; Fehniger, Todd A; Filby, Andrew; Fillatreau, Simon; Follo, Marie; Förster, Irmgard; Foster, John; Foulds, Gemma A; Frenette, Paul S; Galbraith, David; Garbi, Natalio; García-Godoy, Maria Dolores; Geginat, Jens; Ghoreschi, Kamran; Gibellini, Lara; Goettlinger, Christoph; Goodyear, Carl S; Gori, Andrea; Grogan, Jane; Gross, Mor; Grützkau, Andreas; Grummitt, Daryl; Hahn, Jonas; Hammer, Quirin; Hauser, Anja E; Haviland, David L; Hedley, David; Herrera, Guadalupe; Herrmann, Martin; Hiepe, Falk; Holland, Tristan; Hombrink, Pleun; Houston, Jessica P; Hoyer, Bimba F; Huang, Bo; Hunter, Christopher A; Iannone, Anna; Jäck, Hans-Martin; Jávega, Beatriz; Jonjic, Stipan; Juelke, Kerstin; Jung, Steffen; Kaiser, Toralf; Kalina, Tomas; Keller, Baerbel; Khan, Srijit; Kienhöfer, Deborah; Kroneis, Thomas; Kunkel, Désirée; Kurts, Christian; Kvistborg, Pia; Lannigan, Joanne; Lantz, Olivier; Larbi, Anis; LeibundGut-Landmann, Salome; Leipold, Michael D; Levings, Megan K; Litwin, Virginia; Liu, Yanling; Lohoff, Michael; Lombardi, Giovanna; Lopez, Lilly; Lovett-Racke, Amy; Lubberts, Erik; Ludewig, Burkhard; Lugli, Enrico; Maecker, Holden T; Martrus, Glòria; Matarese, Giuseppe; Maueröder, Christian; McGrath, Mairi; McInnes, Iain; Mei, Henrik E; Melchers, Fritz; Melzer, Susanne; Mielenz, Dirk; Mills, Kingston; Mirrer, David; Mjösberg, Jenny; Moore, Jonni; Moran, Barry; Moretta, Alessandro; Moretta, Lorenzo; Mosmann, Tim R; Müller, Susann; Müller, Werner; Münz, Christian; Multhoff, Gabriele; Munoz, Luis Enrique; Murphy, Kenneth M; Nakayama, Toshinori; Nasi, Milena; Neudörfl, Christine; Nolan, John; Nourshargh, Sussan; O'Connor, José-Enrique; Ouyang, Wenjun; Oxenius, Annette; Palankar, Raghav; Panse, Isabel; Peterson, Pärt; Peth, Christian; Petriz, Jordi; Philips, Daisy; Pickl, Winfried; Piconese, Silvia; Pinti, Marcello; Pockley, A Graham; Podolska, Malgorzata Justyna; Pucillo, Carlo; Quataert, Sally A; Radstake, Timothy R D J; Rajwa, Bartek; Rebhahn, Jonathan A; Recktenwald, Diether; Remmerswaal, Ester B M; Rezvani, Katy; Rico, Laura G; Robinson, J Paul; Romagnani, Chiara; Rubartelli, Anna; Ruckert, Beate; Ruland, Jürgen; Sakaguchi, Shimon; Sala-de-Oyanguren, Francisco; Samstag, Yvonne; Sanderson, Sharon; Sawitzki, Birgit; Scheffold, Alexander; Schiemann, Matthias; Schildberg, Frank; Schimisky, Esther; Schmid, Stephan A; Schmitt, Steffen; Schober, Kilian; Schüler, Thomas; Schulz, Axel Ronald; Schumacher, Ton; Scotta, Cristiano; Shankey, T Vincent; Shemer, Anat; Simon, Anna-Katharina; Spidlen, Josef; Stall, Alan M; Stark, Regina; Stehle, Christina; Stein, Merle; Steinmetz, Tobit; Stockinger, Hannes; Takahama, Yousuke; Tarnok, Attila; Tian, ZhiGang; Toldi, Gergely; Tornack, Julia; Traggiai, Elisabetta; Trotter, Joe; Ulrich, Henning; van der Braber, Marlous; van Lier, René A W; Veldhoen, Marc; Vento-Asturias, Salvador; Vieira, Paulo; Voehringer, David; Volk, Hans-Dieter; von Volkmann, Konrad; Waisman, Ari; Walker, Rachael; Ward, Michael D; Warnatz, Klaus; Warth, Sarah; Watson, James V; Watzl, Carsten; Wegener, Leonie; Wiedemann, Annika; Wienands, Jürgen; Willimsky, Gerald; Wing, James; Wurst, Peter; Yu, Liping; Yue, Alice; Zhang, Qianjun; Zhao, Yi; Ziegler, Susanne; Zimmermann, Jakob

European journal of immunology. 2017 10 ; 47:1584-1797