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Akiko Koide

Akiko Koide, PhD

Perlmutter Cancer Center

Research Assistant Professor, Department of Medicine

Keywords
protein engineering, cell signaling, drug discovery
Summary

My research is focused on creating proteins with novel functions for therapy and basic science applications. I have made important contribution to the development of technologies that have made it possible to create synthetic binding proteins from inert protein scaffolds. I am an expert of designing and constructing large combinatorial libraries in the phage- and yeast-display systems. Using these technologies, I have developed potent and selective binding proteins, both antibody and non-antibody molecules, against diverse targets. These novel molecules have enabled numerous collaborative investigations in which we elucidated structures and molecular mechanisms of biomedically important proteins and revealed novel approaches to controlling them.

My colleagues and I are further advancing our protein engineering technologies with a particular emphasis on developing therapeutic strategies against currently “undruggable” cancer drivers.

Phone

646-501-4602

Academic office

522 1st ave, Smilow 1107

11, 1107

New York, NY 10016

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PhD from University of Tokyo

Maso, Lorenzo; Rajak, Epsa; Bang, Injin; Koide, Akiko; Hattori, Takamitsu; Neel, Benjamin G; Koide, Shohei

Proceedings of the National Academy of Sciences of the United States of America (PNAS). 2024 May 28; 121(22):e2319029121

Li, Jianping; Li, Yan; Koide, Akiko; Kuang, Huihui; Torres, Victor J; Koide, Shohei; Wang, Da-Neng; Traaseth, Nathaniel J

Nature communications. 2024 May 27; 15(1):4494

Koide, Akiko; Koide, Shohei

Cold Spring Harbor protocols. 2024 May 02; 2024(5):pdb.over107982

Ivanova, Ellie N.; Shwetar, Jasmine; Devlin, Joseph C.; Buus, Terkild B.; Gray-Gaillard, Sophie; Koide, Akiko; Cornelius, Amber; Samanovic, Marie I.; Herrera, Alberto; Mimitou, Eleni P.; Zhang, Chenzhen; Karmacharya, Trishala; Desvignes, Ludovic; Ødum, Niels; Smibert, Peter; Ulrich, Robert J.; Mulligan, Mark J.; Koide, Shohei; Ruggles, Kelly V.; Herati, Ramin S.; Koralov, Sergei B.

iScience. 2023 Dec 15; 26(<prism:issueIdentifier>12):?-?

Ravn-Boess, Niklas; Roy, Nainita; Hattori, Takamitsu; Bready, Devin; Donaldson, Hayley; Lawson, Christopher; Lapierre, Cathryn; Korman, Aryeh; Rodrick, Tori; Liu, Enze; Frenster, Joshua D; Stephan, Gabriele; Wilcox, Jordan; Corrado, Alexis D; Cai, Julia; Ronnen, Rebecca; Wang, Shuai; Haddock, Sara; Sabio Ortiz, Jonathan; Mishkit, Orin; Khodadadi-Jamayran, Alireza; Tsirigos, Aris; Fenyö, David; Zagzag, David; Drube, Julia; Hoffmann, Carsten; Perna, Fabiana; Jones, Drew R; Possemato, Richard; Koide, Akiko; Koide, Shohei; Park, Christopher Y; Placantonakis, Dimitris G

Cell reports. 2023 Nov 28; 42(11):113374

Meng, Yanxiang; Garnish, Sarah E; Davies, Katherine A; Black, Katrina A; Leis, Andrew P; Horne, Christopher R; Hildebrand, Joanne M; Hoblos, Hanadi; Fitzgibbon, Cheree; Young, Samuel N; Dite, Toby; Dagley, Laura F; Venkat, Aarya; Kannan, Natarajan; Koide, Akiko; Koide, Shohei; Glukhova, Alisa; Czabotar, Peter E; Murphy, James M

Nature communications. 2023 Oct 26; 14(1):6804

Ivanova, Ellie N; Devlin, Joseph C; Buus, Terkild B; Koide, Akiko; Cornelius, Amber; Samanovic, Marie I; Herrera, Alberto; Zhang, Chenzhen; Desvignes, Ludovic; Odum, Niels; Ulrich, Robert; Mulligan, Mark J; Koide, Shohei; Ruggles, Kelly V; Herati, Ramin S; Koralov, Sergei B

medRxiv : the preprint server for health sciences. 2023 Aug 23;

Akkapeddi, Padma; Hattori, Takamitsu; Khan, Imran; Glasser, Eliezra; Koide, Akiko; Ketavarapu, Gayatri; Whaby, Michael; Zuberi, Mariyam; Teng, Kai Wen; Lefler, Julia; Maso, Lorenzo; Bang, Injin; Ostrowski, Michael C; O'Bryan, John P; Koide, Shohei

Proceedings of the National Academy of Sciences of the United States of America (PNAS). 2023 Jul 11; 120(28):e2302485120