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David Fenyo

David Fenyo, PhD

Institute for Systems Genetics

Professor, Department of Biochemistry and Molecular Pharmacology

Keywords
biostatistics, cancer, computational biology, genomics, imaging, pharmacology, proteomics, systems biology
Summary

Our goal is detailed understanding of the dynamics of cellular processes, and we apply mathematical, statistical and computational methods to solve practical problems in experimental design optimization, quantitative data analysis, and in the modeling of biological systems for generating new hypotheses. The focus of our research is proteomic data analysis: we are developing computational methods and databases for protein identification, characterization and quantitation using mass spectrometry-based proteomics.

Phone

917-754-6066

Academic office

435 E 30th St

9th Floor, Room 907

New York, NY 10016

Lab Website
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Professor, Department of Biochemistry and Molecular Pharmacology

Director, Biomedical Informatics Masters Training Program

Director, Systems and Computational Biomedicine PhD Training Program

PhD from Uppsala University

Rockefeller University, Chait Lab

Huang, Kuan-Lin; Wu, Yige; Primeau, Tina; Wang, Yi-Ting; Gao, Yuqian; McMichael, Joshua F; Scott, Adam D; Cao, Song; Wendl, Michael C; Johnson, Kimberly J; Ruggles, Kelly; Held, Jason; Payne, Samuel H; Davies, Sherri R; Dar, Arvin; Kinsinger, Christopher R; Mesri, Mehdi; Rodriguez, Henry; Ellis, Matthew J; Townsend, R Reid; Chen, Feng; Fenyo, David; Li, Shunqiang; Liu, Tao; Carr, Steven A; Ding, Li

Molecular & cellular proteomics. 2019 Aug; 18(8):1630-1650

Zhang, Xu; Nguyen, Khoa Dang; Rudnick, Paul; Roper, Nitin; Kawaler, Emily; Maity, Tapan K; Awasthi, Shivangi; Gao, Shaojian; Biswas, Romi; Venugopalan, Abhilash; Cultraro, Constance M; Fenyö, David; Guha, Udayan

Molecular & cellular proteomics. 2019 Apr; 18(4):622-641

Chen, Yu-Hung; Keegan, Sarah; Kahli, Malik; Tonzi, Peter; Fenyö, David; Huang, Tony T; Smith, Duncan J

Nature structural & molecular biology. 2019 Jan; 26(1):67-77

Steranka, Jared P; Tang, Zuojian; Grivainis, Mark; Huang, Cheng Ran Lisa; Payer, Lindsay M; Rego, Fernanda O R; Miller, Thiago Luiz Araujo; Galante, Pedro A F; Ramaswami, Sitharam; Heguy, Adriana; Fenyö, David; Boeke, Jef D; Burns, Kathleen H

Mobile DNA. 2019; 10:8

Jeong, Yeon-Tae; Simoneschi, Daniele; Keegan, Sarah; Melville, David; Adler, Natalia S; Saraf, Anita; Florens, Laurence; Washburn, Michael P; Cavasotto, Claudio N; Fenyö, David; Cuervo, Ana Maria; Rossi, Mario; Pagano, Michele

eLife. 2018 12 31; 7:

Hadi, Tarik; Boytard, Ludovic; Silvestro, Michele; Alebrahim, Dornazsadat; Jacob, Samson; Feinstein, Jordyn; Barone, Krista; Spiro, Wes; Hutchison, Susan; Simon, Russell; Rateri, Debra; Pinet, Florence; Fenyo, David; Adelman, Mark; Moore, Kathryn J; Eltzschig, Holger K; Daugherty, Alan; Ramkhelawon, Bhama

Nature communications. 2018 11 27; 9(1):5022

Coudray, Nicolas; Ocampo, Paolo Santiago; Sakellaropoulos, Theodore; Narula, Navneet; Snuderl, Matija; Fenyö, David; Moreira, Andre L; Razavian, Narges; Tsirigos, Aristotelis

Nature medicine. 2018 Oct; 24(10):1559-1567

Whelan, Donna R; Lee, Wei Ting C; Yin, Yandong; Ofri, Dylan M; Bermudez-Hernandez, Keria; Keegan, Sarah; Fenyo, David; Rothenberg, Eli

Nature communications. 2018 09 24; 9(1):3882