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Huilin Li

Huilin Li, PhD

Associate Professor, Department of Population Health

Associate Professor, Department of Environmental Medicine

Keywords
Biostatistics, Metagenomics/Microbiomics Data Analysis, Statistical Genomic Methodology, Survey methodology, Study design
Summary

My central research focus is to develop and apply innovative statistical methods to solve challenging data analysis problems in three biomedical research areas: 1) high-throughput metagenomics/microbiome/genetics data analysis, 2) complex survey methodology, and 3) biomedical collaborative research. 

I am the director of Metagenomic/Microbiomic Data Analysis Group in Department of Population health. With NIH’s support, my research group has been focused on developing novel statistical methods in analyzing metagenomics and microbiome data, including microbiome association test, longitudinal microbiome data analysis, and microbiome causal/mediation modeling.  We work closely with various NYULMC research labs to ensure that the latest statistical methods are incorporated for optimal experimental design and downstream data analysis. We develop best practice data analysis pipelines for a variety of experimental designs that integrate proprietary software from the existing microbiome data analysis platform and the best Open Source tools, as well as software developed within our group.

Link to Li Lab

 

Phone

646-501-3651

Academic office

180 Madison Avenue, RM 552

Fifth Floor

New York, NY 10016

Lab Website
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PhD from University of Maryland

National Cancer Institute, Biostatistics Branch, Division of Cancer Epidemiology and Genetics

Popp, Collin J; Zhou, Boyan; Manigrasso, Michaele B; Li, Huilin; Curran, Margaret; Hu, Lu; St-Jules, David E; Alemán, José O; Vanegas, Sally M; Jay, Melanie; Bergman, Michael; Segal, Eran; Sevick, Mary A; Schmidt, Ann M

Current developments in nutrition. 2022 May; 6(5):nzac046

Wu, Fen; Yang, Liying; Hao, Yuhan; Zhou, Boyan; Hu, Jiyuan; Yang, Yaohua; Bedi, Sukhleen; Sanichar, Navin Ganesh; Cheng, Charley; Perez-Perez, Guillermo; Tseng, Wenche; Tseng, Wenzhi; Tseng, Mengkao; Francois, Fritz; Khan, Abraham R; Li, Yihong; Blaser, Martin J; Shu, Xiao-Ou; Long, Jirong; Li, Huilin; Pei, Zhiheng; Chen, Yu

International journal of cancer. 2022 Mar 15; 150(6):928-940

He, Linchen; Wang, Chan; Hu, Jiyuan; Gao, Zhan; Falcone, Emilia; Holland, Steven M; Blaser, Martin J; Li, Huilin

Frontiers in genetics. 2022 Feb; 13:777877

Manigrasso, Michaele B; Rabbani, Piul; Egaña-Gorroño, Lander; Quadri, Nosirudeen; Frye, Laura; Zhou, Boyan; Reverdatto, Sergey; Ramirez, Lisa S; Dansereau, Stephen; Pan, Jinhong; Li, Huilin; D'Agati, Vivette D; Ramasamy, Ravichandran; DeVita, Robert J; Shekhtman, Alexander; Schmidt, Ann Marie

Science translational medicine. 2021 Nov 24; 13(621):eabf7084

Rude, Temitope; Walter, Dawn; Ciprut, Shannon; Kelly, Matthew D; Wang, Chan; Fagerlin, Angela; Langford, Aisha T; Lepor, Herbert; Becker, Daniel J; Li, Huilin; Loeb, Stacy; Ravenell, Joseph; Leppert, John T; Makarov, Danil V

Cancer. 2021 Nov 01; 127(21):3985-3990

Gomes, Claudia; Zuniga, Marisol; Crotty, Kelly A; Qian, Kun; Tovar, Nubia Catalina; Lin, Lawrence Hsu; Argyropoulos, Kimon V; Clancy, Robert; Izmirly, Peter; Buyon, Jill; Lee, David C; Yasnot-Acosta, Maria Fernanda; Li, Huilin; Cotzia, Paolo; Rodriguez, Ana

Life science alliance. 2021 11; 4(11):

Sulaiman, Imran; Chung, Matthew; Angel, Luis; Tsay, Jun-Chieh J; Wu, Benjamin G; Yeung, Stephen T; Krolikowski, Kelsey; Li, Yonghua; Duerr, Ralf; Schluger, Rosemary; Thannickal, Sara A; Koide, Akiko; Rafeq, Samaan; Barnett, Clea; Postelnicu, Radu; Wang, Chang; Banakis, Stephanie; Pérez-Pérez, Lizzette; Shen, Guomiao; Jour, George; Meyn, Peter; Carpenito, Joseph; Liu, Xiuxiu; Ji, Kun; Collazo, Destiny; Labarbiera, Anthony; Amoroso, Nancy; Brosnahan, Shari; Mukherjee, Vikramjit; Kaufman, David; Bakker, Jan; Lubinsky, Anthony; Pradhan, Deepak; Sterman, Daniel H; Weiden, Michael; Heguy, Adriana; Evans, Laura; Uyeki, Timothy M; Clemente, Jose C; de Wit, Emmie; Schmidt, Ann Marie; Shopsin, Bo; Desvignes, Ludovic; Wang, Chan; Li, Huilin; Zhang, Bin; Forst, Christian V; Koide, Shohei; Stapleford, Kenneth A; Khanna, Kamal M; Ghedin, Elodie; Segal, Leopoldo N

Nature microbiology. 2021 Oct; 6(10):1245-1258