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Marcin Imielinski

Marcin Imielinski, MD, PhD

Perlmutter Cancer Center

Member of the Faculty, Department of Pathology

Keywords
genomics, cancer biology, structural variation, molecular pathology

Lab Website
mskilab.org
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Positions

Member of the Faculty, Department of Pathology at NYU Grossman School of Medicine

Director Cancer Genomics Research Program

Graduate Education

MD from University of Pennsylvania

PhD from University of Pennsylvania

Most large structural variants in cancer genomes can be detected without long reads

Choo, Zi-Ning; Behr, Julie M; Deshpande, Aditya; Hadi, Kevin; Yao, Xiaotong; Tian, Huasong; Takai, Kaori; Zakusilo, George; Rosiene, Joel; Da Cruz Paula, Arnaud; Weigelt, Britta; Setton, Jeremy; Riaz, Nadeem; Powell, Simon N; Busam, Klaus; Shoushtari, Alexander N; Ariyan, Charlotte; Reis-Filho, Jorge; de Lange, Titia; Imieliński, Marcin

Nature genetics. 2023 Nov 09;

Long-molecule scars of backup DNA repair in BRCA1- and BRCA2-deficient cancers

Setton, Jeremy; Hadi, Kevin; Choo, Zi-Ning; Kuchin, Katherine S; Tian, Huasong; Da Cruz Paula, Arnaud; Rosiene, Joel; Selenica, Pier; Behr, Julie; Yao, Xiaotong; Deshpande, Aditya; Sigouros, Michael; Manohar, Jyothi; Nauseef, Jones T; Mosquera, Juan-Miguel; Elemento, Olivier; Weigelt, Britta; Riaz, Nadeem; Reis-Filho, Jorge S; Powell, Simon N; Imieliński, Marcin

Nature. 2023 Sep; 621(7977):129-137

The importance of escalating molecular diagnostics in patients with low-grade pediatric brain cancer

Al Assaad, Majd; Gundem, Gunes; Liechty, Benjamin; Sboner, Andrea; Medina, Juan; Papaemmanuil, Elli; Sternberg, Cora N; Marks, Asher; Souweidane, Mark M; Greenfield, Jeffrey P; Tran, Ivy; Snuderl, Matija; Elemento, Oliver; Imielinski, Marcin; Pisapia, David J; Mosquera, Juan Miguel

Cold Spring Harbor molecular case studies. 2023 Aug 31;

Faster detection of somatic structural variants

Choo, Zi-Ning; Imieliński, Marcin

Nature biomedical engineering. 2023 Jul; 7(7):847-848

Author Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers

Yuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J; Yang, Yang; Martincorena, Inigo; Creighton, Chad J; Weinstein, John N; Xu, Yanxun; Han, Leng; Kim, Hyung-Lae; Nakagawa, Hidewaki; Park, Keunchil; Campbell, Peter J; Liang, Han; PCAWG Consortium

Nature genetics. 2023 Jun; 55(6):1078

Molecular evolution of classic Hodgkin lymphoma revealed through whole genome sequencing of Hodgkin and Reed Sternberg cells

Maura, Francesco; Ziccheddu, Bachisio; Xiang, Jenny Z; Bhinder, Bhavneet; Rosiene, Joel; Abascal, Federico; Maclachlan, Kylee H; Eng, Kenneth Wha; Uppal, Manik; He, Feng; Zhang, Wei; Gao, Qi; Yellapantula, Venkata D; Trujillo-Alonso, Vicenta; Park, Sunita I; Oberley, Matthew J; Ruckdeschel, Elizabeth; Lim, Megan S; Wertheim, Gerald B; Barth, Matthew J; Horton, Terzah M; Derkach, Andriy; Kovach, Alexandra E; Forlenza, Christopher J; Zhang, Yanming; Landgren, Ola; Moskowitz, Craig H; Cesarman, Ethel; Imielinski, Marcin; Elemento, Olivier; Roshal, Mikhail; Giulino-Roth, Lisa

Blood cancer discovery. 2023 May 01; 4(3):208-227

Publisher Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

Cortés-Ciriano, Isidro; Lee, Jake June-Koo; Xi, Ruibin; Jain, Dhawal; Jung, Youngsook L; Yang, Lixing; Gordenin, Dmitry; Klimczak, Leszek J; Zhang, Cheng-Zhong; Pellman, David S; PCAWG Structural Variation Working Group; Park, Peter J; PCAWG Consortium

Nature genetics. 2023 May; 55(5):893

Author Correction: Butler enables rapid cloud-based analysis of thousands of human genomes

Yakneen, Sergei; Waszak, Sebastian M; PCAWG Technical Working Group; Gertz, Michael; Korbel, Jan O; PCAWG Consortium

Nature biotechnology. 2023 Apr; 41(4):577

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