Mark Yarmarkovich

Mark Yarmarkovich, PhD

Perlmutter Cancer Center

Assistant Professor, Department of Pathology

Keywords
Cancer Immunotherapy, CAR T cells, Synthetic Biology, Proteomics, Genomics, Protein Engineering, Machine Learning, Bioinformatics, Computational Biology, Structural Biology
Summary

The Yarmarkovich lab aims to enable the development of personalized immunotherapies (CAR T cells, TCRs and off-the-shelf therapies) for all cancer patients. Our work spans the entire workflow from target discovery to clinical application. We work at the multidisciplinary intersection of genomics, proteomics, immunology, protein engineering and computational biology to discover novel tumor-specific targets and engineering the target-specific immune receptors. We have discovered novel tumor targets from previously undruggable proteins and have developed a novel class of "peptide-centric" (PC) CAR T cells that dramatically expand the immunotherapeutically targetable landscape and the addressable patient population. These CAR T constructs completely eradicate tumors in preclinical models and are entering clinical trials in 2024/5.

We are currently expanding these these techniques to other cancers and developing new technologies for the development of personalized immunotherapies.

Projects in the lab include:

- Immunotherapy target discovery
- Pre-clincial CAR T cell development
- Algorithm development for target discovery and safety screening
- CAR T library development
- Expanding addressable patient populations and developing immunotherapies for underserved groups

These focus areas and their associated publications are derived from medical subject headings from PubMed.
represents one publication
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*Due to PubMed processing times, the most recent publications may not be reflected in the timeline.

PhD from University of Pennsylvania

Children’s Hospital of Philadelphia , Oncology

Yarmarkovich, Mark; Marshall, Quinlen F; Warrington, John M; Premaratne, Rasika; Farrel, Alvin; Groff, David; Li, Wei; di Marco, Moreno; Runbeck, Erin; Truong, Hau; Toor, Jugmohit S; Tripathi, Sarvind; Nguyen, Son; Shen, Helena; Noel, Tiffany; Church, Nicole L; Weiner, Amber; Kendsersky, Nathan; Martinez, Dan; Weisberg, Rebecca; Christie, Molly; Eisenlohr, Laurence; Bosse, Kristopher R; Dimitrov, Dimiter S; Stevanovic, Stefan; Sgourakis, Nikolaos G; Kiefel, Ben R; Maris, John M

Nature. 2021 11; 599(7885):477-484

Pascual-Pasto, Guillem; McIntyre, Brendan; Hines, Margaret G; Giudice, Anna M; Garcia-Gerique, Laura; Hoffmann, Jennifer; Mishra, Pamela; Matlaga, Stephanie; Lombardi, Simona; Shraim, Rawan; Schürch, Patrick M; Yarmarkovich, Mark; Hofmann, Ted J; Alikarami, Fatemeh; Martinez, Daniel; Tsang, Matthew; Gil-de-Gómez, Luis; Spear, Timothy T; Bernt, Kathrin M; Wolpaw, Adam J; Dimitrov, Dimiter S; Li, Wei; Bosse, Kristopher R

Nature communications. 2024 Aug 21; 15(1):7141

Yarmarkovich, Mark; Marshall, Quinlen F; Warrington, John M; Premaratne, Rasika; Farrel, Alvin; Groff, David; Li, Wei; di Marco, Moreno; Runbeck, Erin; Truong, Hau; Toor, Jugmohit S; Tripathi, Sarvind; Nguyen, Son; Shen, Helena; Noel, Tiffany; Church, Nicole L; Weiner, Amber; Kendsersky, Nathan; Martinez, Dan; Weisberg, Rebecca; Christie, Molly; Eisenlohr, Laurence; Bosse, Kristopher R; Dimitrov, Dimiter S; Stevanovic, Stefan; Sgourakis, Nikolaos G; Kiefel, Ben R; Maris, John M

Nature. 2023 Nov; 623(7988):820-827

Yarmarkovich, Mark; Warrington, John M; Farrel, Alvin; Maris, John M

Cell reports. Medicine. 2020 06 23; 1(3):100036

Overall, Sarah A; Toor, Jugmohit S; Hao, Stephanie; Yarmarkovich, Mark; Morozov, Giora I; Nguyen, Son; Japp, Alberto Sada; Gonzalez, Nicolas; Moschidi, Danai; Betts, Michael R; Maris, John M; Smibert, Peter; Sgourakis, Nikolaos G

Nature communications. 2020 04 20; 11(1):1909

Yarmarkovich, Mark; Warrington, John M; Farrel, Alvin; Maris, John M

SSRN. 2020 Apr 14; 3575161

Yarmarkovich, Mark; Warrington, John M; Farrel, Alvin; Maris, John M

bioRxiv.org : the preprint server for biology. 2020 Apr 02;

Yarmarkovich, Mark; Farrel, Alvin; Sison, Artemio; di Marco, Moreno; Raman, Pichai; Parris, Joshua L; Monos, Dimitrios; Lee, Hongzhe; Stevanovic, Stefan; Maris, John M

Frontiers in immunology. 2020 Dec; 11:69