Wendy Beguelin, PhD

Perlmutter Cancer Center

Assistant Professor, Department of Medicine

Assistant Professor, Department of Pathology

Keywords
Lymphoma, Epigenetics
Summary

My laboratory investigates how somatic mutations in genes encoding chromatin-modifying proteins drive B-cell lymphoma by reprogramming both malignant cells and the immune microenvironment. We focus on lymphomas arising from the germinal center, where epigenetic regulation is essential for coordinating B-cell function and immune cell interactions.
We define the normal roles of these epigenetic regulators in germinal center biology and determine how lymphoma-associated mutations alter B-cells and their communication with T-cells, macrophages, and other immune and stromal populations to establish a tumor-supportive niche. Our studies combine genetically engineered mouse models with bulk and single-cell genomic and epigenomic profiling, three-dimensional chromatin analyses, and advanced in vivo imaging.
Our work is strongly translational. Mechanistic discoveries are used to identify vulnerabilities in malignant B-cells and in the lymphoma microenvironment, enabling the rational design and testing of combination therapies that target both tumor-intrinsic and microenvironmental dependencies. Our preclinical findings inform the design of biomarker-driven clinical trials.

Academic office

540 First Avenue, Medical Science Building

4th floor, 493C

New York, NY 10016

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Weill Cornell Medicine, Melnick lab

Araujo-Ayala, Ferran; Béguelin, Wendy

Blood. 2025 Oct 09; 146(15):1759-1769

Nguyen, Van Thuy Mai; Namba, Hiroe; Porter, Hayley; Shlyueva, Daria; Lopez, Ernesto; Melcher, Alan; Béguelin, Wendy; Melnick, Ari M; Helin, Kristian

Blood. 2025 Jun 12; 145(24):2873-2886

Griess, Ofir; Furth, Noa; Harpaz, Nofar; Di Bernardo, Nicoletta; Salame, Tomer-Meir; Dassa, Bareket; Karagiannidis, Ioannis; Isshiki, Yusuke; Gross, Menachem; Melnick, Ari M; Béguelin, Wendy; Ron, Guy; Shema, Efrat

PLoS biology. 2025 Jun; 23(6):e3003191

Porazzi, Patrizia; Nason, Siena; Yang, Ziqi; Carturan, Alberto; Ghilardi, Guido; Guruprasad, Puneeth; Patel, Ruchi P; Tan, Melody; Padmanabhan, Anushka Anant; Lemoine, Jean; Fardella, Eugenio; Zhang, Yunlin; Pajarillo, Raymone; Chen, Linhui; Ugwuanyi, Ositadimma; Markowitz, Kelly; Delman, Devora; Angelos, Mathew G; Shestova, Olga; Isshiki, Yusuke; Blanchard, Tatiana; Béguelin, Wendy; Melnick, Ari M; Linette, Gerald P; Beatty, Gregory L; Carreno, Beatriz M; Cohen, Ivan J; Paruzzo, Luca; Schuster, Stephen J; Ruella, Marco

Cancer cell. 2025 Mar 10; 43(3):537-551.e7

Gao, Vianne R; Yang, Rui; Das, Arnav; Luo, Renhe; Luo, Hanzhi; McNally, Dylan R; Karagiannidis, Ioannis; Rivas, Martin A; Wang, Zhong-Min; Barisic, Darko; Karbalayghareh, Alireza; Wong, Wilfred; Zhan, Yingqian A; Chin, Christopher R; Noble, William S; Bilmes, Jeff A; Apostolou, Effie; Kharas, Michael G; Béguelin, Wendy; Viny, Aaron D; Huangfu, Danwei; Rudensky, Alexander Y; Melnick, Ari M; Leslie, Christina S

Nature communications. 2024 Nov 01; 15(1):9432

Li, Jie; Chin, Christopher R; Ying, Hsia-Yuan; Meydan, Cem; Teater, Matthew R; Xia, Min; Farinha, Pedro; Takata, Katsuyoshi; Chu, Chi-Shuen; Jiang, Yiyue; Eagles, Jenna; Passerini, Verena; Tang, Zhanyun; Rivas, Martin A; Weigert, Oliver; Pugh, Trevor J; Chadburn, Amy; Steidl, Christian; Scott, David W; Roeder, Robert G; Mason, Christopher E; Zappasodi, Roberta; Béguelin, Wendy; Melnick, Ari M

Nature communications. 2024 Apr 03; 15(1):2879

Takata, Katsuyoshi; Chong, Lauren C; Ennishi, Daisuke; Aoki, Tomohiro; Li, Michael Yu; Thakur, Avinash; Healy, Shannon; Viganò, Elena; Dao, Tao; Kwon, Daniel; Duns, Gerben; Nielsen, Julie S; Ben-Neriah, Susana; Tse, Ethan; Hung, Stacy S; Boyle, Merrill; Mun, Sung Soo; Bourne, Christopher M; Woolcock, Bruce; Telenius, Adèle; Kishida, Makoto; Rai, Shinya; Zhang, Allen W; Bashashati, Ali; Saberi, Saeed; D'Antonio, Gianluca; Nelson, Brad H; Shah, Sohrab P; Hoodless, Pamela A; Melnick, Ari M; Gascoyne, Randy D; Connors, Joseph M; Scheinberg, David A; Béguelin, Wendy; Scott, David W; Steidl, Christian

Journal of clinical investigation. 2022 May 16; 132(10):

Giefing, Maciej; Gearhart, Micah D; Schneider, Markus; Overbeck, Birte; Klapper, Wolfram; Hartmann, Sylvia; Ustaszewski, Adam; Weniger, Marc A; Wiehle, Laura; Hansmann, Martin-Leo; Melnick, Ari; Béguelin, Wendy; Sundström, Christer; Küppers, Ralf; Bardwell, Vivian J; Siebert, Reiner

Leukemia & lymphoma. 2022 May; 63(5):1080-1090