Shopsin Lab Publications

Investigators in the Shopsin Lab frequently publish their work in leading peer-reviewed journals. Read the latest papers to learn more about our research.

Selected Publications

Heterozygosity for Crohn's disease risk allele of ATG16L1 promotes unique protein interactions and protects against bacterial infection

Yao, Xiaomin; Rudensky, Eugene; Martin, Patricia K; Miller, Brittany M; Vargas, Isabel; Zwack, Erin E; Lacey, Keenan A; He, Zhengxiang; Furtado, Glaucia C; Lira, Sérgio A; Torres, Victor J; Shopsin, Bo; Cadwell, Ken

Immunity. 2025 May 09;

Sex-dependent gastrointestinal colonization resistance to MRSA is microbiota and Th17 dependent

Lejeune, Alannah; Zhou, Chunyi; Ercelen, Defne; Putzel, Gregory; Yao, Xiaomin; Guy, Alyson R; Pawline, Miranda; Podkowik, Magdalena; Pironti, Alejandro; Torres, Victor J; Shopsin, Bo; Cadwell, Ken

eLife. 2025 Apr 08; 13:

Enterobacter hormaechei replaces virulence with carbapenem resistance via porin loss

Perault, Andrew I; John, Amelia St; DuMont, Ashley L; Shopsin, Bo; Pironti, Alejandro; Torres, Victor J

Proceedings of the National Academy of Sciences of the United States of America (PNAS). 2025 Feb 25; 122:e2414315122

Does PCR-based pathogen identification reduce mortality in bloodstream infections? Insights from a difference-in-difference analysis

Gago, Juan; Renson, Audrey; Takats, Courtney; Torres, Victor J; Shopsin, Bo; Thorpe, Lorna E

Infection control & hospital epidemiology. 2025 Feb 14; 1-7

SARS-CoV-2 infection predisposes patients to coinfection with Staphylococcus aureus

Lubkin, Ashira; Bernard-Raichon, Lucie; DuMont, Ashley L; Valero Jimenez, Ana Mayela; Putzel, Gregory G; Gago, Juan; Zwack, Erin E; Olusanya, Olufolakemi; Boguslawski, Kristina M; Dallari, Simone; Dyzenhaus, Sophie; Herrmann, Christin; Ilmain, Juliana K; Isom, Georgia L; Pawline, Miranda; Perault, Andrew I; Perelman, Sofya; Sause, William E; Shahi, Ifrah; St John, Amelia; Tierce, Rebecca; Zheng, Xuhui; Zhou, Chunyi; Noval, Maria G; O'Keeffe, Anna; Podkowik, Magda; Gonzales, Sandra; Inglima, Kenneth; Desvignes, Ludovic; Hochman, Sarah E; Stapleford, Kenneth A; Thorpe, Lorna E; Pironti, Alejandro; Shopsin, Bo; Cadwell, Ken; Dittmann, Meike; Torres, Victor J

MBio. 2024 Aug 14; 15:e0166724

Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

Podkowik, Magdalena; Perault, Andrew I; Putzel, Gregory; Pountain, Andrew; Kim, Jisun; DuMont, Ashley L; Zwack, Erin E; Ulrich, Robert J; Karagounis, Theodora K; Zhou, Chunyi; Haag, Andreas F; Shenderovich, Julia; Wasserman, Gregory A; Kwon, Junbeom; Chen, John; Richardson, Anthony R; Weiser, Jeffrey N; Nowosad, Carla R; Lun, Desmond S; Parker, Dane; Pironti, Alejandro; Zhao, Xilin; Drlica, Karl; Yanai, Itai; Torres, Victor J; Shopsin, Bo

eLife. 2024 Apr 30; 12:

Staphylococcus aureus senses human neutrophils via PerR to coordinate the expression of the toxin LukAB

Savin, Avital; Anderson, Exene E; Dyzenhaus, Sophie; Podkowik, Magdalena; Shopsin, Bo; Pironti, Alejandro; Torres, Victor J

Infection & immunity. 2024 Feb 13; 92:e0052623

Transcription-replication interactions reveal bacterial genome regulation

Pountain, Andrew W; Jiang, Peien; Yao, Tianyou; Homaee, Ehsan; Guan, Yichao; McDonald, Kevin J C; Podkowik, Magdalena; Shopsin, Bo; Torres, Victor J; Golding, Ido; Yanai, Itai

Nature. 2024 Feb ; 626:661-669

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Shopsin Lab Publications | NYU Langone Health