Genome Technology Center
NYU School of Medicine’s Genome Technology Center provides faculty, staff, and partnering researchers with a range of services related to genome, epigenome, and transcriptome analysis. We offer numerous advanced technologies, including the following:
- Illumina deep sequencing and sample preparation for a variety of applications, including DNA and RNA sequencing (DNA- and RNA-seq), exome sequencing, targeted capture, chromatin immunoprecipitation sequencing (ChIP-seq), methylation sequencing (Methyl-seq), metagenomics, and many others
- Automation of Illumina library and targeted capture preps, including 16S ribosomal RNA (rRNA) sequencing
- Oxford Nanopore sequencing (long reads)
- Bio-Rad Droplet Digital™ polymerase chain reaction (PCR)
- Nanostring nCounter
- Single-cell RNA- and DNA-seq using the C1™ Auto Prep System from Fluidigm, and 10x Genomics Chromium™ System
Working closely with the Applied Bioinformatics Laboratories, we also provide expertise on the best strategies to help you achieve research goals in any field related to genomics, and we can tailor bioinformatics analysis to your individual project. If you supply us with nucleic acids, we can perform every step required to help you achieve your desired results.
PacBio Sequel sequencing is here. Pricing depends on the genome size and other parameters. Please contact us to discuss your project.
Pricing Lowered on Low-Input RNA-Seq Preps
Using the Nugen Ovation Trio system, we have automated low-input RNA-seq preps to lower costs. See our price list for automated RNA-seq using as little as 500 pg of RNA, 16 samples minimum.
To reserve time on an instrument, faculty, staff, and investigators must be registered in iLab. We have also provided iLab login instructions for NYU Langone, NYU, NYU College of Dentistry, and external users.
New Sequencing Technologies
To best serve the research community, we’re continually evaluating novel technologies and acquiring new instruments. We can now conduct 800-cell high-throughput single-cell RNA-seq on the C1™ Auto Prep System from Fluidigm, and offer all single-cell RNA-seq and structural variants using the 10x Genomics Chromium™ System. We have also recently acquired an Illumina HiSeq 4000 population-level high-throughput sequencer. We offer full support for all platforms.
To access sequencing results, you need approval from the relevant principal investigator and an account from the administrators of NYU's high-performance computing facility. Please ask the principal investigator to email email@example.com, indicating approval for your access and stating whether the access will be for one run or all of the runs from the lab.
The Genome Technology Center is located at 550 First Avenue, in Medical Science Building 303–308. To inquire about our capabilities and services, please email us at firstname.lastname@example.org or call us at 212-263-8048. To reach Adriana Heguy, PhD, director, email email@example.com.
How to Acknowledge the Genome Technology Center
If you have used instruments, services, expertise, or data provided by NYU School of Medicine’s Genome Technology Center in research that is published in any form or used in grant applications, we appreciate being acknowledged.
This shared resource is partially supported by the Cancer Center Support Grant P30CA016087 at the Laura and Isaac Perlmutter Cancer Center. Please acknowledge this grant in all publications resulting from the use of this facility. Additionally, all publications resulting from the use of this facility are required to abide by the National Institutes of Health Public Access Policy and be deposited in PubMed Central®.
Support for use of our resources may be available upon application to NYU Langone’s Clinical and Translational Research Institute (CTRI). See more information about how to apply for support. If CTRI support is obtained, the following manuscript citation is suggested: “Supported in part by grant UL1 TR00038 from the National Center for Advancing Translational Sciences, National Institutes of Health.”