Multi-Omics Study Design & Data Integration Resource Featured Publications

Faculty and staff of the Multi-Omics Study Design and Data Integration Resource publish frequently in peer-reviewed journals. Here is a selection of their recent publications.

Selected Publications

Multi-omics analysis of a pig-to-human decedent kidney xenotransplant

Schmauch, Eloi; Piening, Brian D; Dowdell, Alexa K; Mohebnasab, Maedeh; Williams, Simon H; Stukalov, Alexey; Robinson, Fred L; Bombardi, Robin; Jaffe, Ian; Khalil, Karen; Kim, Jacqueline; Aljabban, Imad; Eitan, Tal; O'Brien, Darragh P; Rophina, Mercy; Wang, Chan; Bartlett, Alexandra Q; Zanoni, Francesca; Albay, Jon; Andrijevic, David; Maden, Berk; Mauduit, Vincent; Vikman, Susanna; Argibay, Diana; Zayas, Zasha; Wu, Leah; Moi, Kiana; Lau, Billy; Zhang, Weimin; Gragert, Loren; Weldon, Elaina; Gao, Hui; Hamilton, Lauren; Kagermazova, Larisa; Camellato, Brendan R; Gandla, Divya; Bhatt, Riyana; Gao, Sarah; Al-Ali, Rudaynah A; Habara, Alawi H; Chang, Andrew; Ferdosi, Shadi; Chen, Han M; Motter, Jennifer D; Chacon, Fiorella A; Thomas, Scott C; Saxena, Deepak; Fairchild, Robert L; Loupy, Alexandre; Heguy, Adriana; Crawford, Ali; Batzoglou, Serafim; Snyder, Michael P; Siddiqui, Asim; Holmes, Michael V; Chong, Anita S; Kaikkonen, Minna U; Linna-Kuosmanen, Suvi; Ayares, David; Lorber, Marc; Nellore, Anoma; Skolnik, Edward Y; Mattoo, Aprajita; Tatapudi, Vasishta S; Taft, Ryan; Mangiola, Massimo; Guo, Qian; Herati, Ramin S; Stern, Jeffrey; Griesemer, Adam; Kellis, Manolis; Boeke, Jef D; Montgomery, Robert A; Keating, Brendan J

Nature. 2025 Nov 13;

A Culturally and Linguistically Tailored Intervention to Improve Diabetes-Related Outcomes in Chinese Americans With Type 2 Diabetes: Pilot Randomized Controlled Trial

Liu, Jing; Cao, Jiepin; Shi, Yun; Sevick, Mary Ann; Islam, Nadia; Feldman, Naumi; Li, Huilin; Wang, Chan; Zhao, Yanan; Tamura, Kosuke; Levy, Natalie; Jiang, Nan; Zhu, Ziqiang; Wang, Yulin; Hong, Jia; Hu, Lu

JMIR mHealth and uHealth. 2025 Oct 27; 13:e78036

RAGE-mediated activation of the formin DIAPH1 and human macrophage inflammation are inhibited by a small molecule antagonist

Theophall, Gregory G; Manigrasso, Michaele B; Nazarian, Parastou; Premo, Aaron; Reverdatto, Sergey; Yepuri, Gautham; Burz, David S; Vanegas, Sally M; Mangar, Kaamashri; Zhao, Yanan; Li, Huilin; DeVita, Robert J; Ramasamy, Ravichandran; Schmidt, Ann Marie; Shekhtman, Alexander

Cell chemical biology. 2025 Oct 16; 32:1221-1234.e8

Oral Bacterial and Fungal Microbiome and Subsequent Risk for Pancreatic Cancer

Meng, Yixuan; Wu, Feng; Kwak, Soyoung; Wang, Chan; Usyk, Mykhaylo; Freedman, Neal D; Huang, Wen-Yi; Um, Caroline Y; Gonda, Tamas A; Oberstein, Paul E; Li, Huilin; Hayes, Richard B; Ahn, Jiyoung

JAMA oncology. 2025 Sep 18;

Microbial contribution to metabolic niche formation varies across the respiratory tract

Wong, Kendrew K; Wu, Benjamin G; Chung, Matthew; Li, Qinsheng; Darawshy, Fares; Tsay, Jun-Chieh J; Holub, Meredith; Barnett, Clea R; Kwok, Benjamin; Kugler, Matthias C; Chung, Cecilia; Natalini, Jake G; Singh, Shivani; Li, Yonghua; Schluger, Rosemary; Ficaro, Lia; Carpenito, Joseph; Collazo, Destiny; Perez, Luisanny; Kyeremateng, Yaa; Chang, Miao; Czachor, Anna; Singh, Raj; Mccormick, Colin; Campbell, Christina D; Keane, Ruaidhri; Askenazi, Manor; Hansbro, Philip M; Weiden, Michael D; Huang, Yvonne J; Stringer, Kathleen A; Clemente, Jose C; Li, Huilin; Jones, Drew; Ghedin, Elodie; Segal, Leopoldo N; Sulaiman, Imran

Cell host & microbe. 2025 Jul 09; 33:1073-1088.e6

Culturally Tailored Social Media Intervention Improves Health Outcomes in Chinese Americans with Type 2 Diabetes: Preliminary Evidence from a Pilot RCT

Shi, Yun; Sevick, Mary Ann; Tang, Hao; Wang, Chan; Zhao, Yanan; Yoon, SeongHoon; Li, Huilin; Jiang, Yulin; Bai, Yujie; Ong, Iris H; Yang, Ximin; Su, Liwen; Levy, Natalie; Tamura, Kosuke; Hu, Lu

Journal of general internal medicine. 2025 Jul ; 40:2319-2329

Baseline Characteristics of Weight-Loss Success in a Personalized Nutrition Intervention: A Secondary Analysis

Popp, Collin J; Wang, Chan; Berube, Lauren; Curran, Margaret; Hu, Lu; Pompeii, Mary Lou; Barua, Souptik; Li, Huilin; St-Jules, David E; Schoenthaler, Antoinette; Segal, Eran; Bergman, Michael; Sevick, Mary Ann

Nutrients. 2025 Jun 30; 17:

Comparison of Plasma Oxalate Measurement Methods in Patients With End-Stage Kidney Disease

Jaber, Karim; Zaidan, Nadim; Pierce, Kerry; Kim, Sooran; Xiong, Xiaozhong; Ruggles, Kelly; Clish, Clary; Li, Huilin; Nazzal, Lama

Kidney international reports. 2025 Jun ; 10:2045-2048

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Multi-Omics Study Design & Data Integration Resource Featured Publications | NYU Langone Health