Multi-Omics Study Design & Data Integration Resource Featured Publications

Faculty and staff of the Multi-Omics Study Design and Data Integration Resource publish frequently in peer-reviewed journals. Here is a selection of their recent publications.

Selected Publications

Association between dental flossing frequency and oral microbiome in U.S. adults

Xu, Zhijing; Hu, Jinyu; Luo, Huabin; Qi, Xiang; Liu, Ruotong; Liu, Yunrui; Zheng, Yaguang; Li, Huilin; Wu, Bei

Annals of medicine (Helsinki). 2026 Dec ; 58:2614826

Joint Modeling of Longitudinal Biomarker and Survival Outcomes with the Presence of Competing Risk in the Nested Case-Control Studies with Application to the TEDDY Microbiome Dataset

Zhao, Yanan; Lee, Ting-Fang; Zhou, Boyan; Wang, Chan; Schmidt, Ann Marie; Liu, Mengling; Li, Huilin; Hu, Jiyuan

Bioinformatics. 2026 Jan 22;

Personalized dietary feedback mediates the association of dietary self-monitoring adherence and weight loss: a post-hoc analysis of the Personal Diet Study

Berube, Lauren T; Wang, Chan; Curran, Margaret; Pompeii, Mary Lou; Hu, Lu; Barua, Souptik; Li, Huilin; St-Jules, David E; Schoenthaler, Antoinette; Segal, Eran; Bergman, Michael; Popp, Collin J

Journal of nutrition. 2026 Jan 13; 101364

Leveraging videos and community health workers to address social determinants of health in immigrants (LINK-IT): Protocol for a randomized controlled trial

Hu, Lu; Liu, Jing; Yang, Ximin; Teng, Crystal; Li, Huilin; Zhao, Yanan; Levy, Natalie; Zhu, Kelly; Vang, Suzanne; Kwon, Simona C; Feldman, Naumi; Lau, Jennifer; Jiang, Yanping; Trinh-Shevrin, Chau; Islam, Nadia

PloS one. 2026 ; 21:e0341217

Multi-omics analysis of a pig-to-human decedent kidney xenotransplant

Schmauch, Eloi; Piening, Brian D; Dowdell, Alexa K; Mohebnasab, Maedeh; Williams, Simon H; Stukalov, Alexey; Robinson, Fred L; Bombardi, Robin; Jaffe, Ian; Khalil, Karen; Kim, Jacqueline; Aljabban, Imad; Eitan, Tal; O'Brien, Darragh P; Rophina, Mercy; Wang, Chan; Bartlett, Alexandra Q; Zanoni, Francesca; Albay, Jon; Andrijevic, David; Maden, Berk; Mauduit, Vincent; Vikman, Susanna; Argibay, Diana; Zayas, Zasha; Wu, Leah; Moi, Kiana; Lau, Billy; Zhang, Weimin; Gragert, Loren; Weldon, Elaina; Gao, Hui; Hamilton, Lauren; Kagermazova, Larisa; Camellato, Brendan R; Gandla, Divya; Bhatt, Riyana; Gao, Sarah; Al-Ali, Rudaynah A; Habara, Alawi H; Chang, Andrew; Ferdosi, Shadi; Chen, Han M; Motter, Jennifer D; Chacon, Fiorella A; Thomas, Scott C; Saxena, Deepak; Fairchild, Robert L; Loupy, Alexandre; Heguy, Adriana; Crawford, Ali; Batzoglou, Serafim; Snyder, Michael P; Siddiqui, Asim; Holmes, Michael V; Chong, Anita S; Kaikkonen, Minna U; Linna-Kuosmanen, Suvi; Ayares, David; Lorber, Marc; Nellore, Anoma; Skolnik, Edward Y; Mattoo, Aprajita; Tatapudi, Vasishta S; Taft, Ryan; Mangiola, Massimo; Guo, Qian; Herati, Ramin S; Stern, Jeffrey; Griesemer, Adam; Kellis, Manolis; Boeke, Jef D; Montgomery, Robert A; Keating, Brendan J

Nature. 2025 Nov 13;

Oral Bacterial and Fungal Microbiome and Subsequent Risk for Pancreatic Cancer

Meng, Yixuan; Wu, Feng; Kwak, Soyoung; Wang, Chan; Usyk, Mykhaylo; Freedman, Neal D; Huang, Wen-Yi; Um, Caroline Y; Gonda, Tamas A; Oberstein, Paul E; Li, Huilin; Hayes, Richard B; Ahn, Jiyoung

JAMA oncology. 2025 Nov 01; 11:1331-1340

A Culturally and Linguistically Tailored Intervention to Improve Diabetes-Related Outcomes in Chinese Americans With Type 2 Diabetes: Pilot Randomized Controlled Trial

Liu, Jing; Cao, Jiepin; Shi, Yun; Sevick, Mary Ann; Islam, Nadia; Feldman, Naumi; Li, Huilin; Wang, Chan; Zhao, Yanan; Tamura, Kosuke; Levy, Natalie; Jiang, Nan; Zhu, Ziqiang; Wang, Yulin; Hong, Jia; Hu, Lu

JMIR mHealth & uHealth. 2025 Oct 27; 13:e78036

RAGE-mediated activation of the formin DIAPH1 and human macrophage inflammation are inhibited by a small molecule antagonist

Theophall, Gregory G; Manigrasso, Michaele B; Nazarian, Parastou; Premo, Aaron; Reverdatto, Sergey; Yepuri, Gautham; Burz, David S; Vanegas, Sally M; Mangar, Kaamashri; Zhao, Yanan; Li, Huilin; DeVita, Robert J; Ramasamy, Ravichandran; Schmidt, Ann Marie; Shekhtman, Alexander

Cell chemical biology. 2025 Oct 16; 32:1221-1234.e8

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Multi-Omics Study Design & Data Integration Resource Featured Publications | NYU Langone Health